Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Gm45701-201ENSMUST00000212049 235 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Mir3068-201ENSMUST00000083004 136 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Mir484-201ENSMUST00000093566 67 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Sh3rf2Q8BZT2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm23311-201ENSMUST00000104152 134 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm25346-201ENSMUST00000104509 128 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm14513-201ENSMUST00000117403 123 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm13455-201ENSMUST00000118767 517 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm14796-201ENSMUST00000121216 959 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm12630-201ENSMUST00000121575 784 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm9274-201ENSMUST00000182505 984 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Mir7669-201ENSMUST00000183442 58 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm28918-201ENSMUST00000188822 699 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm43033-201ENSMUST00000199682 425 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm18805-201ENSMUST00000206872 655 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm5055-201ENSMUST00000215697 581 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Cma2-202ENSMUST00000228263 857 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.65□□□□□ -1.34
Sh3rf2Q8BZT2 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.65□□□□□ -1.35
Sh3rf2Q8BZT2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Gm14580-201ENSMUST00000119122 718 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Gm12229-201ENSMUST00000120487 468 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Gm12307-201ENSMUST00000120581 590 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Gm7212-201ENSMUST00000120817 348 ntBASIC6.64□□□□□ -1.35
Sh3rf2Q8BZT2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms