Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm11877-201ENSMUST00000118921 852 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm22342-201ENSMUST00000122647 298 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm37376-201ENSMUST00000192176 453 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm19269-201ENSMUST00000211401 804 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 A1cf-203ENSMUST00000224400 1204 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Usp40Q8BWR4 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Usp40Q8BWR4 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Usp40Q8BWR4 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Usp40Q8BWR4 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.96□□□□□ -0.97
Usp40Q8BWR4 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Usp40Q8BWR4 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm13772-201ENSMUST00000118431 317 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm22985-201ENSMUST00000122754 116 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm8506-201ENSMUST00000186661 829 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm37005-201ENSMUST00000193281 1164 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm42736-201ENSMUST00000200723 1353 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp40Q8BWR4 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm12643-201ENSMUST00000116078 374 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm22103-201ENSMUST00000116733 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm26475-201ENSMUST00000116769 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm23620-201ENSMUST00000116812 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm25042-201ENSMUST00000116856 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm25540-201ENSMUST00000116880 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm12788-201ENSMUST00000119090 308 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm12181-201ENSMUST00000121448 531 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm22518-201ENSMUST00000158267 68 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm23550-201ENSMUST00000179003 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm25123-201ENSMUST00000179154 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm25353-201ENSMUST00000179366 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm22992-201ENSMUST00000179496 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm25892-201ENSMUST00000179867 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm24092-201ENSMUST00000180257 121 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm18348-201ENSMUST00000191227 820 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms