Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sp140Q6NSQ5 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm15048-201ENSMUST00000118201 954 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm6142-201ENSMUST00000120290 325 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm22820-201ENSMUST00000157205 329 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm24422-201ENSMUST00000157800 119 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm5456-201ENSMUST00000170706 844 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm22993-201ENSMUST00000175423 254 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm17045-201ENSMUST00000178600 844 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Mir8105-201ENSMUST00000184718 89 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm18183-201ENSMUST00000191024 615 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm19124-201ENSMUST00000191041 832 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm33571-201ENSMUST00000193271 657 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm5711-201ENSMUST00000197896 421 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sp140Q6NSQ5 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Gm2178-201ENSMUST00000104927 357 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Gm25509-201ENSMUST00000116985 106 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Gm11987-201ENSMUST00000118524 381 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Mir6367-201ENSMUST00000183385 102 ntBASIC6.69□□□□□ -1.34
Sp140Q6NSQ5 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms