Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm15216-201ENSMUST00000118058 277 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm12713-201ENSMUST00000118404 764 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm13222-201ENSMUST00000119638 138 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.34□□□□□ -1.39
ClpbQ60649 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm12504-202ENSMUST00000148026 306 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm16260-201ENSMUST00000155141 304 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm16102-201ENSMUST00000160955 420 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm16298-201ENSMUST00000161107 420 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm4202-201ENSMUST00000169025 733 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm10136-201ENSMUST00000183196 435 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Mir6337-201ENSMUST00000184194 105 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm18849-201ENSMUST00000189861 560 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm37493-201ENSMUST00000193167 433 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm19039-201ENSMUST00000204363 575 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm45122-201ENSMUST00000206376 784 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm7351-201ENSMUST00000210745 580 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm3213-201ENSMUST00000219296 441 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ClpbQ60649 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.34□□□□□ -1.39
ClpbQ60649 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.34□□□□□ -1.39
ClpbQ60649 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
ClpbQ60649 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
ClpbQ60649 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ClpbQ60649 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm45885-202ENSMUST00000211520 1383 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Mir678-201ENSMUST00000102114 84 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm11318-201ENSMUST00000118640 961 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm12135-201ENSMUST00000119170 466 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm13462-201ENSMUST00000121472 961 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm22523-201ENSMUST00000158696 100 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm20454-201ENSMUST00000172713 221 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm6726-201ENSMUST00000172786 681 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.33□□□□□ -1.4
ClpbQ60649 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm9367-201ENSMUST00000205703 546 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.33□□□□□ -1.4
ClpbQ60649 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ClpbQ60649 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Thap6-201ENSMUST00000191860 3151 ntBASIC6.33□□□□□ -1.4
ClpbQ60649 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms