Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ccbe1Q3MI99 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.34□□□□□ -1.4
Ccbe1Q3MI99 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ccbe1Q3MI99 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm18594-201ENSMUST00000175733 1403 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm26469-201ENSMUST00000116765 121 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm15057-201ENSMUST00000121516 534 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm25845-201ENSMUST00000122588 310 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm20545-201ENSMUST00000174739 210 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm29663-201ENSMUST00000186962 853 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm29161-201ENSMUST00000188250 699 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm28413-201ENSMUST00000189369 291 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm8023-201ENSMUST00000195298 903 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm43036-201ENSMUST00000200594 373 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm43928-201ENSMUST00000203737 409 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm8168-201ENSMUST00000209631 948 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm45255-201ENSMUST00000209943 811 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm45712-201ENSMUST00000212417 335 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm6885-201ENSMUST00000217261 372 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccbe1Q3MI99 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm12993-201ENSMUST00000119900 479 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms