Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm9088-201ENSMUST00000220237 508 ntBASIC6.7□□□□□ -1.34
Cxcl12P40224 Gm9321-201ENSMUST00000221179 778 ntBASIC6.7□□□□□ -1.34
Cxcl12P40224 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.7□□□□□ -1.34
Cxcl12P40224 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.7□□□□□ -1.34
Cxcl12P40224 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.7□□□□□ -1.34
Cxcl12P40224 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cxcl12P40224 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.7□□□□□ -1.34
Cxcl12P40224 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cxcl12P40224 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cxcl12P40224 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm14115-201ENSMUST00000119242 482 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Mir7006-201ENSMUST00000183624 69 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm27409-201ENSMUST00000184727 80 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm36262-201ENSMUST00000223274 499 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Cxcl12P40224 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.69□□□□□ -1.34
Cxcl12P40224 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm24731-201ENSMUST00000158227 131 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm24957-201ENSMUST00000179604 132 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm29357-201ENSMUST00000186877 698 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm37070-201ENSMUST00000193272 460 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.68□□□□□ -1.34
Cxcl12P40224 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cxcl12P40224 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.68□□□□□ -1.34
Cxcl12P40224 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cxcl12P40224 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 632.5 ms