Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC8.58□□□□□ -1.04
Col18a1P39061 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Col18a1P39061 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm43062-201ENSMUST00000196302 1319 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm24541-201ENSMUST00000103871 96 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm11893-201ENSMUST00000117829 491 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm2199-201ENSMUST00000119065 874 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm12808-201ENSMUST00000120597 404 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm24236-201ENSMUST00000157794 134 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm8506-201ENSMUST00000186661 829 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.58□□□□□ -1.04
Col18a1P39061 AV026068-231ENSMUST00000225862 482 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Col18a1P39061 Mir218-2-201ENSMUST00000083649 110 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Col18a1P39061 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm14539-201ENSMUST00000117527 174 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Gm11737-201ENSMUST00000118713 468 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.57□□□□□ -1.04
Col18a1P39061 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Gm6061-201ENSMUST00000175860 492 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Gm8920-201ENSMUST00000196153 924 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Gm18781-201ENSMUST00000211252 924 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 AC122858.1-201ENSMUST00000226212 433 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 AC122858.3-201ENSMUST00000226341 740 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Gm25682-201ENSMUST00000083942 164 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm37589-201ENSMUST00000193609 3994 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col18a1P39061 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col18a1P39061 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.57□□□□□ -1.04
Col18a1P39061 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm7048-201ENSMUST00000199395 1891 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm29516-201ENSMUST00000190402 468 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm19256-201ENSMUST00000218550 231 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Col18a1P39061 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC8.56□□□□□ -1.04
Col18a1P39061 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms