Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm21889-201ENSMUST00000188487 695 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm20932-201ENSMUST00000189115 694 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm21920-201ENSMUST00000190042 695 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29369-201ENSMUST00000190674 615 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm18865-201ENSMUST00000193011 1171 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm8182-201ENSMUST00000197863 769 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm8539-201ENSMUST00000199822 501 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm44865-201ENSMUST00000207240 531 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.15□□□□□ -1.26
Usp4P35123 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.15□□□□□ -1.26
Usp4P35123 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.15□□□□□ -1.26
Usp4P35123 AC167977.2-201ENSMUST00000225676 682 ntBASIC7.15□□□□□ -1.26
Usp4P35123 AC154419.1-201ENSMUST00000227627 272 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp4P35123 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp4P35123 Mir365-2-201ENSMUST00000083555 112 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp4P35123 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp4P35123 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp4P35123 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Usp4P35123 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.15□□□□□ -1.27
Usp4P35123 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp4P35123 Gm18493-201ENSMUST00000192084 1612 ntBASIC7.15□□□□□ -1.27
Usp4P35123 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Usp4P35123 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp4P35123 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
Usp4P35123 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp4P35123 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.15□□□□□ -1.27
Usp4P35123 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.15□□□□□ -1.27
Usp4P35123 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Usp4P35123 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.15□□□□□ -1.27
Usp4P35123 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp4P35123 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm13690-201ENSMUST00000118989 285 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm11866-201ENSMUST00000120209 335 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm11257-201ENSMUST00000121313 315 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp4P35123 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Gm24685-201ENSMUST00000157764 285 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.14□□□□□ -1.27
Usp4P35123 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Usp4P35123 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm37370-201ENSMUST00000191996 1410 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm37376-201ENSMUST00000192176 453 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm7341-201ENSMUST00000192183 926 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm36928-201ENSMUST00000192466 694 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm36974-201ENSMUST00000194200 1071 ntBASIC7.14□□□□□ -1.27
Usp4P35123 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm37325-201ENSMUST00000194971 694 ntBASIC7.14□□□□□ -1.27
Usp4P35123 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp4P35123 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp4P35123 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp4P35123 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp4P35123 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms