Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.15□□□□□ -1.59
Sdc1P18828 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sdc1P18828 Gm9237-201ENSMUST00000221499 548 ntBASIC5.15□□□□□ -1.59
Sdc1P18828 Gm46424-201ENSMUST00000221567 168 ntBASIC5.15□□□□□ -1.59
Sdc1P18828 Gm10126-201ENSMUST00000221732 168 ntBASIC5.15□□□□□ -1.59
Sdc1P18828 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sdc1P18828 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sdc1P18828 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sdc1P18828 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.15□□□□□ -1.59
Sdc1P18828 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.15□□□□□ -1.59
Sdc1P18828 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.15□□□□□ -1.59
Sdc1P18828 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC5.15□□□□□ -1.59
Sdc1P18828 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Sdc1P18828 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm14248-201ENSMUST00000117790 544 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm13525-201ENSMUST00000120607 478 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm5135-201ENSMUST00000121100 573 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm6451-201ENSMUST00000121488 717 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC5.14□□□□□ -1.59
Sdc1P18828 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm22698-201ENSMUST00000175375 108 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.14□□□□□ -1.59
Sdc1P18828 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm29778-201ENSMUST00000201667 466 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm4605-201ENSMUST00000203148 625 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm18838-201ENSMUST00000204855 886 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm44722-201ENSMUST00000206473 436 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 AC127224.1-201ENSMUST00000218094 453 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.14□□□□□ -1.59
Sdc1P18828 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.14□□□□□ -1.59
Sdc1P18828 AC131745.3-201ENSMUST00000223582 554 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 AV026068-225ENSMUST00000225042 490 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sdc1P18828 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.14□□□□□ -1.59
Sdc1P18828 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Sdc1P18828 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sdc1P18828 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm22774-201ENSMUST00000102084 109 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm23748-201ENSMUST00000104227 131 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms