Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm34768-201ENSMUST00000193884 565 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm45485-201ENSMUST00000211229 357 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm24695-201ENSMUST00000083877 83 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxa9P09631 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxa9P09631 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.62□□□□□ -1.35
Hoxa9P09631 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxa9P09631 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm17137-202ENSMUST00000165729 957 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm6061-201ENSMUST00000175860 492 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm17048-201ENSMUST00000179266 847 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm43233-201ENSMUST00000200491 616 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm9535-201ENSMUST00000218499 768 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxa9P09631 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.61□□□□□ -1.35
Hoxa9P09631 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm11821-201ENSMUST00000117335 979 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm14550-201ENSMUST00000117918 407 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm15621-201ENSMUST00000119162 364 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm11198-201ENSMUST00000119771 974 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm26162-201ENSMUST00000157793 132 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm24343-201ENSMUST00000158708 111 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm20620-201ENSMUST00000177528 168 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms