Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm24519-201ENSMUST00000104507 132 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm6746-201ENSMUST00000108774 483 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm13338-201ENSMUST00000120235 361 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm13357-201ENSMUST00000120528 537 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm14070-201ENSMUST00000120773 428 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm16284-201ENSMUST00000140995 400 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm9529-201ENSMUST00000177598 579 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm26595-201ENSMUST00000181585 484 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Pea15b-201ENSMUST00000182806 387 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm29369-201ENSMUST00000190674 615 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm38373-201ENSMUST00000192042 288 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm43147-201ENSMUST00000196944 542 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm23604-202ENSMUST00000198428 137 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm43377-201ENSMUST00000201640 455 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Klra13-ps-203ENSMUST00000204367 850 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm44590-201ENSMUST00000206161 391 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.16□□□□□ -1.58
Hmgb3O54879 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmgb3O54879 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Hmgb3O54879 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.16□□□□□ -1.58
Hmgb3O54879 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmgb3O54879 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmgb3O54879 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.15□□□□□ -1.58
Hmgb3O54879 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.15□□□□□ -1.58
Hmgb3O54879 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmgb3O54879 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmgb3O54879 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.15□□□□□ -1.58
Hmgb3O54879 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hmgb3O54879 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmgb3O54879 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
Hmgb3O54879 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Hmgb3O54879 Gm25724-201ENSMUST00000104531 117 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm12072-201ENSMUST00000118293 715 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm12040-201ENSMUST00000118357 537 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm22214-201ENSMUST00000157563 172 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm23071-201ENSMUST00000158242 115 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm26211-201ENSMUST00000158578 129 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm3760-201ENSMUST00000167475 804 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm18833-201ENSMUST00000173218 862 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm27178-201ENSMUST00000184962 340 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
Hmgb3O54879 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms