Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.41□□□□□ -1.38
Pcdh1F7BJK1 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm25773-201ENSMUST00000116718 127 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm14893-201ENSMUST00000117904 282 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm12090-201ENSMUST00000118692 758 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm12123-201ENSMUST00000120348 472 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm12005-201ENSMUST00000121451 379 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm12518-201ENSMUST00000122075 779 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm2709-201ENSMUST00000142979 350 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm22895-201ENSMUST00000157508 308 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm7426-201ENSMUST00000179046 404 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm25120-201ENSMUST00000180148 79 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm27156-201ENSMUST00000184589 754 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm27782-201ENSMUST00000185059 199 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm28416-201ENSMUST00000188334 292 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm9451-201ENSMUST00000188491 604 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm37225-201ENSMUST00000193423 325 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm43556-201ENSMUST00000196186 681 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm43476-201ENSMUST00000197873 405 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm30708-201ENSMUST00000202183 312 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm43922-201ENSMUST00000205071 328 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm18160-201ENSMUST00000214279 827 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 AC116465.1-201ENSMUST00000220324 235 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 AC140208.1-201ENSMUST00000226609 285 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm2840-201ENSMUST00000048361 411 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm9801-201ENSMUST00000054860 408 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm22578-201ENSMUST00000083730 107 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Mir463-201ENSMUST00000093570 75 ntBASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh1F7BJK1 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Pcdh1F7BJK1 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms