Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 AC122878.1-201ENSMUST00000227716 1460 ntBASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim39Q9ESN2 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm23358-201ENSMUST00000103887 110 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm15766-201ENSMUST00000118025 813 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm11865-201ENSMUST00000118093 859 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm13407-201ENSMUST00000118256 360 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm11997-201ENSMUST00000118697 313 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm12873-201ENSMUST00000119988 422 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm12773-201ENSMUST00000120134 587 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm15192-201ENSMUST00000121005 293 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm24050-201ENSMUST00000158623 290 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm26092-201ENSMUST00000179798 97 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm27186-201ENSMUST00000184223 307 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Mir6912-201ENSMUST00000184456 70 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm7412-201ENSMUST00000191692 605 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm6828-201ENSMUST00000207902 1186 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 AC137117.3-201ENSMUST00000226265 485 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm26264-201ENSMUST00000083278 159 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Mir146b-201ENSMUST00000093619 109 ntBASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim39Q9ESN2 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms