Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44279-201ENSMUST00000205154 472 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm44892-201ENSMUST00000208595 488 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm44554-201ENSMUST00000208738 147 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm45514-201ENSMUST00000211531 689 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm9788-201ENSMUST00000057038 906 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Mir7b-201ENSMUST00000083557 111 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm10205-201ENSMUST00000087431 234 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Brf1Q8CFK2 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm13156-201ENSMUST00000118348 321 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm13455-201ENSMUST00000118767 517 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm5793-201ENSMUST00000119393 630 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm26037-201ENSMUST00000158150 311 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm22094-201ENSMUST00000158976 117 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm8454-201ENSMUST00000196980 811 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm45196-201ENSMUST00000206751 825 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm45845-201ENSMUST00000207326 582 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm6436-201ENSMUST00000077163 451 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Olfr687-201ENSMUST00000098154 938 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Brf1Q8CFK2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.83□□□□□ -1.16
Brf1Q8CFK2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm22267-201ENSMUST00000104008 131 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm15186-201ENSMUST00000119345 563 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm12105-201ENSMUST00000120846 779 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm12804-201ENSMUST00000121030 999 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm7494-201ENSMUST00000121248 441 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm25989-201ENSMUST00000158761 133 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm4202-201ENSMUST00000169025 733 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm28011-201ENSMUST00000184097 175 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms