Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Sertad4-201ENSMUST00000016406 3090 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Depdc1b-205ENSMUST00000171178 1404 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Slc12a4-202ENSMUST00000116429 3755 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Oas1c-201ENSMUST00000117193 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Ccdc80-201ENSMUST00000061050 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Pla2g6-202ENSMUST00000166977 3365 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Rnf19a-203ENSMUST00000228358 3452 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm12004-201ENSMUST00000117869 718 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm13592-201ENSMUST00000118148 1010 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm7657-201ENSMUST00000118851 666 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm5787-201ENSMUST00000183049 1038 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm29159-201ENSMUST00000187969 379 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm36973-201ENSMUST00000193942 259 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm37486-201ENSMUST00000195663 405 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm18538-201ENSMUST00000204265 484 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm6375-201ENSMUST00000205201 1145 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm17950-201ENSMUST00000214617 646 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 AC125488.2-201ENSMUST00000218908 793 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC9.33□□□□□ -0.92
Trim35Q8C006 AC165159.2-201ENSMUST00000224080 441 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Vti1a-202ENSMUST00000223690 4175 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 AC101875.1-201ENSMUST00000222666 2223 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Alox15-201ENSMUST00000019068 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Clstn3-202ENSMUST00000112523 3703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm37145-201ENSMUST00000193540 2756 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Bcas1-202ENSMUST00000068137 2769 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Wdhd1-202ENSMUST00000111792 4174 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Foxp3-201ENSMUST00000045566 3572 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm45577-201ENSMUST00000210206 2287 ntBASIC9.33□□□□□ -0.92
Trim35Q8C006 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm6682-201ENSMUST00000169666 1346 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm32849-201ENSMUST00000208696 1798 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Fmo4-201ENSMUST00000028014 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 AL450321.1-201ENSMUST00000220600 3550 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 AC153566.1-201ENSMUST00000216441 2057 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Txnrd1-205ENSMUST00000219368 3622 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Thpo-202ENSMUST00000115437 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm23129-201ENSMUST00000104259 132 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm22019-201ENSMUST00000104359 96 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm12240-201ENSMUST00000120178 229 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm15570-201ENSMUST00000122093 625 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm15727-201ENSMUST00000122416 437 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm23837-201ENSMUST00000122656 286 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm16358-201ENSMUST00000146046 210 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm25687-201ENSMUST00000175442 241 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm26960-201ENSMUST00000182263 412 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm29434-201ENSMUST00000187426 260 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm8454-201ENSMUST00000196980 811 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm15860-203ENSMUST00000197262 360 ntTSL 3 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm6637-201ENSMUST00000204884 382 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm45549-201ENSMUST00000210180 975 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm46142-201ENSMUST00000213332 481 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 AC159899.1-201ENSMUST00000214024 733 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm5173-201ENSMUST00000219616 950 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 CT030175.1-201ENSMUST00000220822 408 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC9.32□□□□□ -0.92
Trim35Q8C006 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 AC138765.1-201ENSMUST00000228657 385 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm26456-201ENSMUST00000082831 111 ntBASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm4541-201ENSMUST00000208901 1848 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms