Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm4410-201ENSMUST00000199349 686 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm43849-201ENSMUST00000201086 215 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm18781-201ENSMUST00000211252 924 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm46203-201ENSMUST00000218130 478 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 AC124408.1-201ENSMUST00000228938 707 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ClpbQ60649 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm25587-201ENSMUST00000082498 166 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm24621-201ENSMUST00000082679 140 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ClpbQ60649 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
ClpbQ60649 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.36□□□□□ -1.39
ClpbQ60649 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.36□□□□□ -1.39
ClpbQ60649 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ClpbQ60649 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
ClpbQ60649 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ClpbQ60649 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ClpbQ60649 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ClpbQ60649 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm15311-201ENSMUST00000119682 282 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm15305-201ENSMUST00000120354 288 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm12540-201ENSMUST00000121938 319 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm14847-201ENSMUST00000121978 519 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.35□□□□□ -1.39
ClpbQ60649 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm9127-201ENSMUST00000188041 985 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm43160-201ENSMUST00000196453 421 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm44856-201ENSMUST00000206639 304 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm44582-201ENSMUST00000209125 445 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm18914-201ENSMUST00000214625 616 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm17849-201ENSMUST00000219788 853 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.35□□□□□ -1.39
ClpbQ60649 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ClpbQ60649 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ClpbQ60649 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm24405-201ENSMUST00000083033 167 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
ClpbQ60649 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ClpbQ60649 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
ClpbQ60649 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ClpbQ60649 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.35□□□□□ -1.39
ClpbQ60649 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ClpbQ60649 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
ClpbQ60649 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ClpbQ60649 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms