Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm3351-201ENSMUST00000193454 505 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.21□□□□□ -1.26
Sox9Q04887 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Sox9Q04887 Gm8667-201ENSMUST00000211112 449 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 AC133517.2-201ENSMUST00000226820 690 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC7.21□□□□□ -1.26
Sox9Q04887 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Sox9Q04887 Gm21731-201ENSMUST00000079524 489 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Sox9Q04887 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
Sox9Q04887 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.21□□□□□ -1.26
Sox9Q04887 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Sox9Q04887 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Grik1-209ENSMUST00000227986 2942 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox9Q04887 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm8424-201ENSMUST00000117716 988 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm12710-201ENSMUST00000119011 216 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm11350-201ENSMUST00000121436 870 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm12618-201ENSMUST00000121754 483 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm16027-201ENSMUST00000161618 758 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC7.2□□□□□ -1.26
Sox9Q04887 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm4373-201ENSMUST00000178571 556 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm6693-201ENSMUST00000189583 813 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm38022-201ENSMUST00000191762 403 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm37349-201ENSMUST00000194205 624 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm18747-201ENSMUST00000198129 648 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm4928-201ENSMUST00000219622 850 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox9Q04887 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox9Q04887 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Sox9Q04887 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox9Q04887 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox9Q04887 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm28359-201ENSMUST00000187470 1322 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.2□□□□□ -1.26
Sox9Q04887 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Sox9Q04887 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox9Q04887 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.19□□□□□ -1.26
Sox9Q04887 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox9Q04887 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox9Q04887 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox9Q04887 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms