Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm42799-201ENSMUST00000201331 328 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Gm9535-201ENSMUST00000218499 768 ntBASIC7.11□□□□□ -1.27
CiitaP79621 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.11□□□□□ -1.27
CiitaP79621 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Mir484-201ENSMUST00000093566 67 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
CiitaP79621 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
CiitaP79621 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Cmah-208ENSMUST00000224819 9482 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.11□□□□□ -1.27
CiitaP79621 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CiitaP79621 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm14513-201ENSMUST00000117403 123 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Gm11462-201ENSMUST00000117749 562 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Gm15765-201ENSMUST00000118407 910 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Gm14158-201ENSMUST00000118409 308 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
CiitaP79621 Mir1900-201ENSMUST00000122714 78 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.1□□□□□ -1.27
CiitaP79621 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm5260-201ENSMUST00000186157 949 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Gm37376-201ENSMUST00000192176 453 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.1□□□□□ -1.27
CiitaP79621 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm26442-201ENSMUST00000082588 153 ntBASIC7.1□□□□□ -1.27
CiitaP79621 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CiitaP79621 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CiitaP79621 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.1□□□□□ -1.27
CiitaP79621 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
CiitaP79621 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.1□□□□□ -1.27
CiitaP79621 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.1□□□□□ -1.27
CiitaP79621 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CiitaP79621 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.09□□□□□ -1.27
CiitaP79621 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.09□□□□□ -1.27
CiitaP79621 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.09□□□□□ -1.27
CiitaP79621 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.09□□□□□ -1.27
CiitaP79621 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CiitaP79621 Gm25346-201ENSMUST00000104509 128 ntBASIC7.09□□□□□ -1.27
CiitaP79621 Gm11271-201ENSMUST00000116054 440 ntBASIC7.09□□□□□ -1.27
CiitaP79621 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms