Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.02□□□□□ -1.29
NcanP55066 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NcanP55066 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NcanP55066 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
NcanP55066 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.02□□□□□ -1.29
NcanP55066 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
NcanP55066 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.01□□□□□ -1.29
NcanP55066 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm15560-201ENSMUST00000117107 643 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm13193-201ENSMUST00000117275 225 ntBASIC7.01□□□□□ -1.29
NcanP55066 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Gm23891-201ENSMUST00000158114 138 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm19840-201ENSMUST00000169624 882 ntBASIC7.01□□□□□ -1.29
NcanP55066 Mir7056-201ENSMUST00000183776 59 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm27853-201ENSMUST00000184176 250 ntBASIC7.01□□□□□ -1.29
NcanP55066 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
NcanP55066 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC7.01□□□□□ -1.29
NcanP55066 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Gm18850-201ENSMUST00000211578 388 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.01□□□□□ -1.29
NcanP55066 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC7.01□□□□□ -1.29
NcanP55066 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
NcanP55066 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.01□□□□□ -1.29
NcanP55066 Mir218-2-201ENSMUST00000083649 110 ntBASIC7.01□□□□□ -1.29
NcanP55066 Mir331-201ENSMUST00000083673 96 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.01□□□□□ -1.29
NcanP55066 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.01□□□□□ -1.29
NcanP55066 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NcanP55066 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NcanP55066 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NcanP55066 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Gm13313-201ENSMUST00000118938 1084 ntBASIC7□□□□□ -1.29
NcanP55066 Gm14038-201ENSMUST00000121500 807 ntBASIC7□□□□□ -1.29
NcanP55066 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7□□□□□ -1.29
NcanP55066 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7□□□□□ -1.29
NcanP55066 Gm22596-201ENSMUST00000157601 316 ntBASIC7□□□□□ -1.29
NcanP55066 Gm24957-201ENSMUST00000179604 132 ntBASIC7□□□□□ -1.29
NcanP55066 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Gm18290-201ENSMUST00000202900 844 ntBASIC7□□□□□ -1.29
NcanP55066 Gm45082-201ENSMUST00000206082 601 ntBASIC7□□□□□ -1.29
NcanP55066 Gm45874-201ENSMUST00000212423 346 ntBASIC7□□□□□ -1.29
NcanP55066 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
NcanP55066 Gm46369-201ENSMUST00000221577 401 ntBASIC7□□□□□ -1.29
NcanP55066 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7□□□□□ -1.29
NcanP55066 Gm6474-201ENSMUST00000223250 699 ntBASIC7□□□□□ -1.29
NcanP55066 AC159979.1-201ENSMUST00000227927 342 ntBASIC7□□□□□ -1.29
NcanP55066 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Gm37109-201ENSMUST00000195475 2254 ntBASIC7□□□□□ -1.29
NcanP55066 Gm36936-201ENSMUST00000194508 2749 ntBASIC7□□□□□ -1.29
NcanP55066 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7□□□□□ -1.29
NcanP55066 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
NcanP55066 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NcanP55066 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7□□□□□ -1.29
NcanP55066 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NcanP55066 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7□□□□□ -1.29
NcanP55066 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7□□□□□ -1.29
NcanP55066 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NcanP55066 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms