Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Sox1P53783 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Gm8424-201ENSMUST00000117716 988 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Gm6044-201ENSMUST00000121819 499 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC7.48□□□□□ -1.21
Sox1P53783 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.48□□□□□ -1.21
Sox1P53783 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Mir1929-201ENSMUST00000158635 93 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.48□□□□□ -1.21
Sox1P53783 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
Sox1P53783 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.48□□□□□ -1.21
Sox1P53783 Gm28980-201ENSMUST00000187877 219 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Gm29141-201ENSMUST00000190357 882 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.48□□□□□ -1.21
Sox1P53783 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.48□□□□□ -1.21
Sox1P53783 Gm17995-201ENSMUST00000209266 530 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Gm18259-201ENSMUST00000220991 2010 ntBASIC7.48□□□□□ -1.21
Sox1P53783 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.48□□□□□ -1.21
Sox1P53783 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.48□□□□□ -1.21
Sox1P53783 AC152394.2-202ENSMUST00000228503 1064 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.48□□□□□ -1.21
Sox1P53783 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Sox1P53783 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.48□□□□□ -1.21
Sox1P53783 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Sox1P53783 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC7.48□□□□□ -1.21
Sox1P53783 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.48□□□□□ -1.21
Sox1P53783 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.48□□□□□ -1.21
Sox1P53783 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.48□□□□□ -1.21
Sox1P53783 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Sox1P53783 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Gm12183-201ENSMUST00000120566 1848 ntBASIC7.48□□□□□ -1.21
Sox1P53783 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Sox1P53783 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm42981-201ENSMUST00000200184 3252 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm8728-201ENSMUST00000207367 2178 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm8486-201ENSMUST00000207508 2171 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm8685-201ENSMUST00000207567 2183 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm16443-201ENSMUST00000207909 2184 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Sox1P53783 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm37304-201ENSMUST00000193833 2886 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Sox1P53783 Gm25724-201ENSMUST00000104531 117 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Mir669d-2-201ENSMUST00000116854 86 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm5228-201ENSMUST00000117186 357 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm11905-201ENSMUST00000117653 678 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm14018-201ENSMUST00000119042 455 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC7.47□□□□□ -1.21
Sox1P53783 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm2709-201ENSMUST00000142979 350 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm22655-201ENSMUST00000174949 96 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm29357-201ENSMUST00000186877 698 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms