Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm23426-201ENSMUST00000122483 318 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.08□□□□□ -1.28
Sdc2P43407 Gm24359-201ENSMUST00000158418 221 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Mir6908-201ENSMUST00000184056 63 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm29496-201ENSMUST00000189854 693 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm29072-201ENSMUST00000191149 678 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm6681-201ENSMUST00000205215 607 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm31711-201ENSMUST00000220687 196 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Gm7557-201ENSMUST00000221935 865 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sdc2P43407 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Sdc2P43407 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.08□□□□□ -1.28
Sdc2P43407 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sdc2P43407 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sdc2P43407 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sdc2P43407 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Sdc2P43407 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm43488-201ENSMUST00000198874 2504 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm12115-201ENSMUST00000119969 447 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm25675-201ENSMUST00000174979 118 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.07□□□□□ -1.28
Sdc2P43407 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm37770-201ENSMUST00000192855 772 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm4548-201ENSMUST00000208487 509 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.07□□□□□ -1.28
Sdc2P43407 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.07□□□□□ -1.28
Sdc2P43407 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sdc2P43407 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm23054-201ENSMUST00000082804 162 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.07□□□□□ -1.28
Sdc2P43407 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sdc2P43407 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sdc2P43407 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sdc2P43407 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sdc2P43407 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sdc2P43407 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sdc2P43407 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm25093-201ENSMUST00000103993 132 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm13455-201ENSMUST00000118767 517 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Gm14212-201ENSMUST00000122023 826 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Gm8648-201ENSMUST00000122457 221 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Gm23884-201ENSMUST00000122687 294 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm25487-201ENSMUST00000158725 125 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm8715-201ENSMUST00000162728 531 ntBASIC7.06□□□□□ -1.28
Sdc2P43407 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sdc2P43407 Gm2229-201ENSMUST00000193328 710 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms