Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm3810-201ENSMUST00000122413 476 ntBASIC7.64□□□□□ -1.19
Traf1P39428 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.64□□□□□ -1.19
Traf1P39428 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.64□□□□□ -1.19
Traf1P39428 Gm412-201ENSMUST00000193360 948 ntBASIC7.64□□□□□ -1.19
Traf1P39428 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.64□□□□□ -1.19
Traf1P39428 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Traf1P39428 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Traf1P39428 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.64□□□□□ -1.19
Traf1P39428 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.64□□□□□ -1.19
Traf1P39428 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.64□□□□□ -1.19
Traf1P39428 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Traf1P39428 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Traf1P39428 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Traf1P39428 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Traf1P39428 Gm11920-201ENSMUST00000118491 563 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Gm15502-201ENSMUST00000121449 208 ntBASIC7.63□□□□□ -1.19
Traf1P39428 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.63□□□□□ -1.19
Traf1P39428 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Mir6921-201ENSMUST00000183719 80 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Gm29197-201ENSMUST00000185922 702 ntBASIC7.63□□□□□ -1.19
Traf1P39428 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.63□□□□□ -1.19
Traf1P39428 Gm17997-201ENSMUST00000211801 840 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Gm7769-201ENSMUST00000212900 933 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Gm22684-201ENSMUST00000082849 132 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Traf1P39428 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.63□□□□□ -1.19
Traf1P39428 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.63□□□□□ -1.19
Traf1P39428 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Traf1P39428 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.62□□□□□ -1.19
Traf1P39428 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Gm13222-201ENSMUST00000119638 138 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.62□□□□□ -1.19
Traf1P39428 Gm23031-201ENSMUST00000157998 119 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Mir6348-201ENSMUST00000183804 120 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms