Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.71□□□□□ -1.34
LdlrP35951 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
LdlrP35951 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.71□□□□□ -1.34
LdlrP35951 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LdlrP35951 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.71□□□□□ -1.34
LdlrP35951 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
LdlrP35951 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LdlrP35951 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm12504-202ENSMUST00000148026 306 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Gm25722-201ENSMUST00000157498 279 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LdlrP35951 Mir6241-201ENSMUST00000184225 103 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm5066-201ENSMUST00000188479 822 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm28466-201ENSMUST00000190678 659 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 Gm18430-201ENSMUST00000197534 682 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm44227-201ENSMUST00000203576 241 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Gm17834-201ENSMUST00000204322 891 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
LdlrP35951 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.7□□□□□ -1.34
LdlrP35951 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LdlrP35951 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
LdlrP35951 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LdlrP35951 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LdlrP35951 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.69□□□□□ -1.34
LdlrP35951 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LdlrP35951 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.69□□□□□ -1.34
LdlrP35951 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
LdlrP35951 Gm26144-201ENSMUST00000104475 132 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Gm13702-201ENSMUST00000118542 825 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.69□□□□□ -1.34
LdlrP35951 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LdlrP35951 Gm25574-201ENSMUST00000175245 249 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LdlrP35951 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.69□□□□□ -1.34
LdlrP35951 Gm28958-201ENSMUST00000185864 703 ntBASIC6.69□□□□□ -1.34
LdlrP35951 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC6.69□□□□□ -1.34
LdlrP35951 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm43546-201ENSMUST00000196721 943 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.69□□□□□ -1.34
LdlrP35951 Gm42713-201ENSMUST00000202709 945 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm45136-201ENSMUST00000205793 943 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.69□□□□□ -1.34
LdlrP35951 Gm44681-201ENSMUST00000208447 842 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm44954-201ENSMUST00000208513 227 ntBASIC6.69□□□□□ -1.34
LdlrP35951 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.69□□□□□ -1.34
LdlrP35951 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms