Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a2P25318 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a2P25318 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a2P25318 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col8a2P25318 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a2P25318 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC5.35□□□□□ -1.55
Col8a2P25318 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a2P25318 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm13626-201ENSMUST00000119435 402 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm14294-201ENSMUST00000119749 751 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm12890-201ENSMUST00000120885 373 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm27970-201ENSMUST00000184854 407 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm6074-201ENSMUST00000193340 451 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm37901-201ENSMUST00000195107 514 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Gm3266-201ENSMUST00000217832 591 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a2P25318 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.34□□□□□ -1.55
Col8a2P25318 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a2P25318 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a2P25318 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Col8a2P25318 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col8a2P25318 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col8a2P25318 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col8a2P25318 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col8a2P25318 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col8a2P25318 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Col8a2P25318 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Col8a2P25318 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col8a2P25318 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Gm14173-201ENSMUST00000117690 278 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Gm13578-201ENSMUST00000120849 590 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm25057-201ENSMUST00000157366 88 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Gm25219-201ENSMUST00000157545 330 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Mir6337-201ENSMUST00000184194 105 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm8869-201ENSMUST00000195222 947 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.33□□□□□ -1.56
Col8a2P25318 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.33□□□□□ -1.56
Col8a2P25318 Gm7986-201ENSMUST00000221336 551 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.33□□□□□ -1.56
Col8a2P25318 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.33□□□□□ -1.56
Col8a2P25318 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a2P25318 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms