Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm38097-201ENSMUST00000192936 439 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 Gm5309-201ENSMUST00000197416 677 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 Gm42581-201ENSMUST00000201774 966 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Gm2089-201ENSMUST00000218294 479 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 AC107663.1-201ENSMUST00000224257 468 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 CT030194.2-201ENSMUST00000225752 379 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 AC166574.7-201ENSMUST00000228502 704 ntBASIC8.5□□□□□ -1.05
NpcdF8VQB8 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NpcdF8VQB8 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm14893-201ENSMUST00000117904 282 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm25653-201ENSMUST00000158473 138 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm2959-201ENSMUST00000169844 621 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Mir5112-201ENSMUST00000174897 60 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm20689-201ENSMUST00000176033 279 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Mir7211-201ENSMUST00000184071 63 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm28958-201ENSMUST00000185864 703 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm6077-201ENSMUST00000196008 499 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm3678-201ENSMUST00000218888 492 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 AC134439.1-201ENSMUST00000220923 600 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 CT025579.4-201ENSMUST00000224598 627 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm5583-201ENSMUST00000174328 1519 ntBASIC8.49□□□□□ -1.05
NpcdF8VQB8 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.48□□□□□ -1.05
NpcdF8VQB8 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NpcdF8VQB8 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.48□□□□□ -1.05
NpcdF8VQB8 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.48□□□□□ -1.05
NpcdF8VQB8 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
NpcdF8VQB8 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.48□□□□□ -1.05
NpcdF8VQB8 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms