Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm22684-201ENSMUST00000082849 132 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm11902-201ENSMUST00000118849 270 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm7802-201ENSMUST00000216464 262 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm8863-201ENSMUST00000216630 926 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm18405-201ENSMUST00000220743 511 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm7557-201ENSMUST00000221935 865 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm12040-201ENSMUST00000118357 537 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm15616-201ENSMUST00000118662 375 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scn1aA2APX8 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm25660-201ENSMUST00000158470 104 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm29650-201ENSMUST00000188485 742 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm37477-201ENSMUST00000195215 884 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.69□□□□□ -1.34
Scn1aA2APX8 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 Gm24200-201ENSMUST00000082955 157 ntBASIC6.69□□□□□ -1.34
Scn1aA2APX8 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm12396-201ENSMUST00000121600 306 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm28996-201ENSMUST00000190316 721 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 AV026068-216ENSMUST00000223874 328 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 AV026068-218ENSMUST00000223980 575 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms