Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm25379-201ENSMUST00000104338 114 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm11972-201ENSMUST00000118514 389 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm12757-201ENSMUST00000119465 800 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm25047-201ENSMUST00000122667 104 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm22226-201ENSMUST00000157355 109 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm36994-201ENSMUST00000192941 492 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm19739-201ENSMUST00000195941 153 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm42983-201ENSMUST00000199879 815 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm5305-201ENSMUST00000204010 746 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm45122-201ENSMUST00000206376 784 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm18601-201ENSMUST00000220831 634 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC147245.1-201ENSMUST00000223294 677 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC140209.1-201ENSMUST00000227875 284 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AW822073-201ENSMUST00000075305 555 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm13106-201ENSMUST00000119045 1443 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.99□□□□□ -1.45
H2afb3S4R1G7 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm22543-201ENSMUST00000104347 94 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Serpina3h-202ENSMUST00000116393 1226 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm12306-201ENSMUST00000117256 171 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm13463-201ENSMUST00000119020 233 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm13754-201ENSMUST00000120486 998 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm11498-201ENSMUST00000120660 949 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm6451-201ENSMUST00000121488 717 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm15242-201ENSMUST00000122459 283 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm23222-201ENSMUST00000158117 76 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm26025-201ENSMUST00000158655 271 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm18848-201ENSMUST00000182069 792 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm27178-201ENSMUST00000184962 340 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm43390-201ENSMUST00000196614 421 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm43222-201ENSMUST00000199013 603 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms