Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm12573-201ENSMUST00000118158 286 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm13156-201ENSMUST00000118348 321 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm12242-201ENSMUST00000118824 738 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm14531-201ENSMUST00000120845 285 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm12804-201ENSMUST00000121030 999 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm15349-201ENSMUST00000121154 204 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm13462-201ENSMUST00000121472 961 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm23810-201ENSMUST00000175150 74 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm26738-201ENSMUST00000181312 601 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm10136-201ENSMUST00000183196 435 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm3841-201ENSMUST00000191399 451 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm7019-201ENSMUST00000194122 369 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm45246-201ENSMUST00000210820 367 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm19116-201ENSMUST00000218592 642 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Thap6-201ENSMUST00000191860 3151 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm15311-201ENSMUST00000119682 282 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm4914-201ENSMUST00000119757 459 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm15305-201ENSMUST00000120354 288 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm11553-201ENSMUST00000120682 240 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm7613-201ENSMUST00000139070 487 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm9285-201ENSMUST00000177691 697 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm5283-201ENSMUST00000177874 334 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm9127-201ENSMUST00000188041 985 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm43157-201ENSMUST00000198223 412 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm18012-201ENSMUST00000204558 773 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm18040-201ENSMUST00000217922 827 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim3Q9R1R2 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 168.9 ms