Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Upk3aQ9JKX8 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Upk3aQ9JKX8 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Upk3aQ9JKX8 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Upk3aQ9JKX8 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.21□□□□□ -1.41
Upk3aQ9JKX8 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Upk3aQ9JKX8 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm15016-201ENSMUST00000117300 720 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm8855-201ENSMUST00000118888 878 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm15181-201ENSMUST00000120142 177 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm11370-201ENSMUST00000120583 260 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm7212-201ENSMUST00000120817 348 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm15502-201ENSMUST00000121449 208 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm25374-201ENSMUST00000158158 101 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm37770-201ENSMUST00000192855 772 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm42708-201ENSMUST00000196332 905 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Upk3aQ9JKX8 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm22284-201ENSMUST00000104132 132 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm14747-201ENSMUST00000149888 984 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm22235-201ENSMUST00000157085 110 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm43243-201ENSMUST00000199964 278 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.2□□□□□ -1.42
Upk3aQ9JKX8 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms