Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm22194-201ENSMUST00000116869 95 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm17217-201ENSMUST00000166613 469 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm20615-201ENSMUST00000177503 705 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm27152-201ENSMUST00000183828 99 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm44360-201ENSMUST00000200081 82 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm44312-201ENSMUST00000203536 469 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm45026-201ENSMUST00000205292 833 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm19212-201ENSMUST00000216642 862 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 AV026068-216ENSMUST00000223874 328 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 AV026068-218ENSMUST00000223980 575 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.63□□□□□ -1.35
Cstf1Q99LC2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm14938-201ENSMUST00000119482 943 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Snora47-201ENSMUST00000157483 138 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm26607-201ENSMUST00000180661 867 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm28934-201ENSMUST00000186491 346 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm45782-201ENSMUST00000212670 366 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms