Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm13455-201ENSMUST00000118767 517 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm11976-201ENSMUST00000119236 295 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm5387-201ENSMUST00000119776 857 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm7571-201ENSMUST00000120252 927 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm25550-201ENSMUST00000158079 128 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm29107-201ENSMUST00000190910 347 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm37709-201ENSMUST00000195074 600 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm18586-201ENSMUST00000217265 518 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm5436-201ENSMUST00000058103 643 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm6436-201ENSMUST00000077163 451 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm22710-201ENSMUST00000116892 125 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm12937-201ENSMUST00000118333 448 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm26037-201ENSMUST00000158150 311 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm23762-201ENSMUST00000158348 106 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm25675-201ENSMUST00000174979 118 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm5871-201ENSMUST00000176461 718 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm28925-201ENSMUST00000188586 168 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm37215-201ENSMUST00000194927 1259 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm7452-201ENSMUST00000200764 788 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm45885-202ENSMUST00000211520 1383 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.16□□□□□ -1.26
Trim9Q8C7M3 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Trim9Q8C7M3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm16073-201ENSMUST00000116032 517 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms