Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Mir6986-201ENSMUST00000184483 58 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm43105-201ENSMUST00000202987 459 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 AC125409.2-201ENSMUST00000221888 2158 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm13006-201ENSMUST00000118683 214 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm22106-201ENSMUST00000122544 127 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm2959-201ENSMUST00000169844 621 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm31166-201ENSMUST00000209326 288 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm9293-201ENSMUST00000223096 306 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Col6a6Q8C6K9 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col6a6Q8C6K9 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col6a6Q8C6K9 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col6a6Q8C6K9 AC153955.4-201ENSMUST00000217069 2752 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm26570-201ENSMUST00000180672 342 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm3544-201ENSMUST00000196129 305 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm9110-201ENSMUST00000219035 617 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Snora44-201ENSMUST00000082670 129 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm12442-201ENSMUST00000118372 338 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm23757-201ENSMUST00000158353 100 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm3008-201ENSMUST00000160566 571 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm5418-201ENSMUST00000206932 528 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Gm18409-202ENSMUST00000220105 529 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a6Q8C6K9 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms