Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir16-2-201ENSMUST00000083672 95 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm10221-201ENSMUST00000088299 309 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm19074-201ENSMUST00000218915 1429 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm42701-201ENSMUST00000196117 1657 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm37407-201ENSMUST00000194793 1316 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm23701-201ENSMUST00000103893 110 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm25276-201ENSMUST00000104300 124 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm14248-201ENSMUST00000117790 544 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm11928-201ENSMUST00000119323 437 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm13815-201ENSMUST00000119963 412 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm22794-201ENSMUST00000157228 306 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm22035-201ENSMUST00000157284 228 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm3221-201ENSMUST00000164869 440 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm27013-201ENSMUST00000182441 1024 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm37225-201ENSMUST00000193423 325 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm43768-201ENSMUST00000198380 1258 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm7948-201ENSMUST00000212607 844 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 AV026068-219ENSMUST00000224148 933 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 AV026068-220ENSMUST00000224153 1147 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 CT033778.1-201ENSMUST00000224767 767 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Gm18493-201ENSMUST00000192084 1612 ntBASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim47Q8C0E3 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm9078-201ENSMUST00000119126 617 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms