Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC116476.1-201ENSMUST00000226274 2318 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm30698-201ENSMUST00000214789 3198 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm12565-201ENSMUST00000119004 649 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm12244-201ENSMUST00000119500 291 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm13924-201ENSMUST00000119899 486 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm6461-201ENSMUST00000120015 633 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm25295-201ENSMUST00000122794 306 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm26346-201ENSMUST00000157525 329 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm22693-201ENSMUST00000175049 442 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm27653-201ENSMUST00000185037 136 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm29036-201ENSMUST00000189967 877 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Trbv27-201ENSMUST00000193711 277 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm42619-201ENSMUST00000197564 1136 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm9710-201ENSMUST00000198053 499 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 BC049739-201ENSMUST00000202626 660 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm44833-201ENSMUST00000208368 331 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm45259-201ENSMUST00000209217 1006 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 AC112680.2-201ENSMUST00000213119 595 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 AC165292.1-201ENSMUST00000215218 620 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm4803-201ENSMUST00000218729 1279 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 AC126043.1-201ENSMUST00000221304 1141 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Olfr519-201ENSMUST00000084752 960 ntBASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp40Q8BWR4 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 AC138765.2-202ENSMUST00000228418 3435 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm26289-201ENSMUST00000104169 131 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm9005-201ENSMUST00000119908 607 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm14300-201ENSMUST00000120800 946 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm24687-201ENSMUST00000157758 241 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm18833-201ENSMUST00000173218 862 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm27005-201ENSMUST00000182783 921 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm29509-201ENSMUST00000185716 321 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm28665-201ENSMUST00000189269 670 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm37725-201ENSMUST00000193965 2125 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm44422-201ENSMUST00000204142 1025 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm2926-201ENSMUST00000205625 239 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm17838-201ENSMUST00000205872 876 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm7171-201ENSMUST00000177413 1349 ntBASIC9□□□□□ -0.97
Usp40Q8BWR4 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Usp40Q8BWR4 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp40Q8BWR4 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms