Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd1P40201 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd1P40201 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC9.62□□□□□ -0.87
Chd1P40201 Mir5103-201ENSMUST00000175111 79 ntBASIC9.62□□□□□ -0.87
Chd1P40201 Gm18865-201ENSMUST00000193011 1171 ntBASIC9.62□□□□□ -0.87
Chd1P40201 Gm37689-201ENSMUST00000193139 275 ntBASIC9.62□□□□□ -0.87
Chd1P40201 Gm17992-201ENSMUST00000207346 1072 ntBASIC9.62□□□□□ -0.87
Chd1P40201 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd1P40201 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chd1P40201 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Chd1P40201 n-R5s69-201ENSMUST00000083872 119 ntBASIC9.62□□□□□ -0.87
Chd1P40201 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chd1P40201 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC9.62□□□□□ -0.87
Chd1P40201 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Chd1P40201 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm14935-201ENSMUST00000121528 1708 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Gm13416-201ENSMUST00000117264 1612 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm24886-201ENSMUST00000104384 123 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm22094-201ENSMUST00000158976 117 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Gm8454-201ENSMUST00000196980 811 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC9.61□□□□□ -0.87
Chd1P40201 AC117240.2-201ENSMUST00000220921 263 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm37120-201ENSMUST00000193350 5959 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Gm30698-201ENSMUST00000214789 3198 ntBASIC9.61□□□□□ -0.87
Chd1P40201 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd1P40201 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd1P40201 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Chd1P40201 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Chd1P40201 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Chd1P40201 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Chd1P40201 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Chd1P40201 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Gm15120-201ENSMUST00000120602 301 ntBASIC9.6□□□□□ -0.87
Chd1P40201 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC9.6□□□□□ -0.87
Chd1P40201 Gm13899-201ENSMUST00000121519 1255 ntBASIC9.6□□□□□ -0.87
Chd1P40201 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC9.6□□□□□ -0.87
Chd1P40201 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC9.6□□□□□ -0.87
Chd1P40201 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC9.6□□□□□ -0.87
Chd1P40201 Gm44683-201ENSMUST00000209088 484 ntBASIC9.6□□□□□ -0.87
Chd1P40201 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC9.6□□□□□ -0.87
Chd1P40201 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd1P40201 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Chd1P40201 AC120153.1-201ENSMUST00000226502 1311 ntBASIC9.59□□□□□ -0.87
Chd1P40201 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd1P40201 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd1P40201 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd1P40201 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC9.59□□□□□ -0.87
Chd1P40201 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms