Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 Mir700-201ENSMUST00000102169 79 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 Gm16074-201ENSMUST00000119524 444 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.32□□□□□ -1.24
Col2a1P28481 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.32□□□□□ -1.24
Col2a1P28481 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col2a1P28481 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col2a1P28481 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col2a1P28481 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm10764-202ENSMUST00000220397 2335 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Col2a1P28481 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm23485-201ENSMUST00000104181 155 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm13114-201ENSMUST00000117605 106 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm21756-201ENSMUST00000178380 930 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm21405-201ENSMUST00000179024 930 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm6055-201ENSMUST00000180532 378 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm27460-201ENSMUST00000184213 100 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.31□□□□□ -1.24
Col2a1P28481 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm21191-201ENSMUST00000186484 930 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm29503-201ENSMUST00000191044 930 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm18592-201ENSMUST00000221529 276 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm10221-201ENSMUST00000088299 309 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm37221-201ENSMUST00000194472 3007 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Col2a1P28481 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.31□□□□□ -1.24
Col2a1P28481 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col2a1P28481 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col2a1P28481 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm11976-201ENSMUST00000119236 295 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm7931-201ENSMUST00000121537 271 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms