Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BdnfP21237 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
BdnfP21237 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BdnfP21237 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
BdnfP21237 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
BdnfP21237 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
BdnfP21237 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Mir697-201ENSMUST00000102316 109 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm12321-201ENSMUST00000121485 804 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.53□□□□□ -1.36
BdnfP21237 Gm22600-201ENSMUST00000157598 269 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm24286-201ENSMUST00000157632 128 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.53□□□□□ -1.36
BdnfP21237 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Gm27866-201ENSMUST00000184459 171 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm27266-201ENSMUST00000184521 123 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
BdnfP21237 Gm6472-202ENSMUST00000187973 582 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm28117-201ENSMUST00000188472 371 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Gm6077-201ENSMUST00000196008 499 ntBASIC6.53□□□□□ -1.36
BdnfP21237 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Gm43894-201ENSMUST00000203274 688 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.53□□□□□ -1.36
BdnfP21237 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.53□□□□□ -1.36
BdnfP21237 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.53□□□□□ -1.36
BdnfP21237 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Gm18601-201ENSMUST00000220831 634 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.53□□□□□ -1.36
BdnfP21237 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
BdnfP21237 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
BdnfP21237 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
BdnfP21237 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
BdnfP21237 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.53□□□□□ -1.36
BdnfP21237 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
BdnfP21237 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
BdnfP21237 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
BdnfP21237 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
BdnfP21237 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.52□□□□□ -1.37
BdnfP21237 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
BdnfP21237 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.52□□□□□ -1.37
BdnfP21237 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
BdnfP21237 Mir760-201ENSMUST00000103257 119 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.52□□□□□ -1.37
BdnfP21237 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.52□□□□□ -1.37
BdnfP21237 Gm17184-201ENSMUST00000111864 462 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Gm7129-201ENSMUST00000117402 997 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm13196-201ENSMUST00000118297 379 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.52□□□□□ -1.37
BdnfP21237 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.52□□□□□ -1.37
BdnfP21237 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm24130-201ENSMUST00000158536 151 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.52□□□□□ -1.37
BdnfP21237 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.52□□□□□ -1.37
BdnfP21237 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm29197-201ENSMUST00000185922 702 ntBASIC6.52□□□□□ -1.37
BdnfP21237 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BdnfP21237 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms