Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm44463-201ENSMUST00000198895 137 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm7832-201ENSMUST00000202613 880 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm2221-201ENSMUST00000209342 418 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm45795-201ENSMUST00000211847 400 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC5.18□□□□□ -1.58
Sdc1P18828 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm46203-201ENSMUST00000218130 478 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm5948-201ENSMUST00000219627 839 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 AC162183.1-201ENSMUST00000224843 472 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 AC125087.1-201ENSMUST00000227552 514 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sdc1P18828 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sdc1P18828 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm24173-201ENSMUST00000104130 128 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm25498-201ENSMUST00000104424 129 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm14356-201ENSMUST00000118322 869 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm14353-201ENSMUST00000122200 869 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm25842-201ENSMUST00000122590 322 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm26480-201ENSMUST00000122619 297 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm26025-201ENSMUST00000158655 271 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm22523-201ENSMUST00000158696 100 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 n-R5s93-201ENSMUST00000180091 119 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm27762-201ENSMUST00000183417 109 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm19124-201ENSMUST00000191041 832 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm37477-201ENSMUST00000195215 884 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm8077-201ENSMUST00000209221 1024 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm45454-201ENSMUST00000211484 455 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 AC132384.10-201ENSMUST00000217862 1204 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm3785-201ENSMUST00000221000 202 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 AC154380.1-201ENSMUST00000226804 720 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sdc1P18828 Mir3068-201ENSMUST00000083004 136 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.17□□□□□ -1.58
Sdc1P18828 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Sdc1P18828 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Sdc1P18828 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sdc1P18828 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm43747-201ENSMUST00000201412 1330 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.17□□□□□ -1.58
Sdc1P18828 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms