Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm13451-201ENSMUST00000117649 592 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm14173-201ENSMUST00000117690 278 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.58□□□□□ -1.2
Col1a1P11087 Gm23031-201ENSMUST00000157998 119 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm26357-201ENSMUST00000158218 115 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm18290-201ENSMUST00000202900 844 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm44768-201ENSMUST00000205719 393 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm45750-201ENSMUST00000211966 354 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col1a1P11087 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col1a1P11087 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Col1a1P11087 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Col1a1P11087 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm22714-201ENSMUST00000116894 78 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Gm13207-201ENSMUST00000119862 773 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm3650-201ENSMUST00000180600 747 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.57□□□□□ -1.2
Col1a1P11087 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm5080-201ENSMUST00000220341 743 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col1a1P11087 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col1a1P11087 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col1a1P11087 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.57□□□□□ -1.2
Col1a1P11087 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm5512-201ENSMUST00000218013 1353 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col1a1P11087 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.57□□□□□ -1.2
Col1a1P11087 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
Col1a1P11087 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm15073-201ENSMUST00000117432 634 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Gm13890-201ENSMUST00000117578 390 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Gm16269-201ENSMUST00000160532 409 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Gm44795-201ENSMUST00000205496 319 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 AC113198.1-201ENSMUST00000226353 832 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col1a1P11087 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Col1a1P11087 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm5832-201ENSMUST00000121704 1582 ntBASIC7.56□□□□□ -1.2
Col1a1P11087 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms