Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm13265-201ENSMUST00000118090 421 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.65□□□□□ -1.34
Hoxa9P09631 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm25219-201ENSMUST00000157545 330 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxa9P09631 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm26557-201ENSMUST00000180756 493 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Mir6348-201ENSMUST00000183804 120 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm37809-201ENSMUST00000195050 931 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm4083-201ENSMUST00000207158 451 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Gm19116-201ENSMUST00000218592 642 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.65□□□□□ -1.34
Hoxa9P09631 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxa9P09631 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Hoxa9P09631 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.65□□□□□ -1.35
Hoxa9P09631 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxa9P09631 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.65□□□□□ -1.35
Hoxa9P09631 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Hoxa9P09631 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxa9P09631 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.65□□□□□ -1.35
Hoxa9P09631 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxa9P09631 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Gm14580-201ENSMUST00000119122 718 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Gm28996-201ENSMUST00000190316 721 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxa9P09631 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxa9P09631 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.64□□□□□ -1.35
Hoxa9P09631 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.64□□□□□ -1.35
Hoxa9P09631 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxa9P09631 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms