Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
OtofQ9ESF1 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
OtofQ9ESF1 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm12937-201ENSMUST00000118333 448 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm29778-201ENSMUST00000201667 466 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm7780-201ENSMUST00000214787 406 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm13207-201ENSMUST00000119862 773 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm23430-201ENSMUST00000122490 314 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm18199-201ENSMUST00000173820 835 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm15257-201ENSMUST00000177680 883 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm15252-201ENSMUST00000177750 883 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm15256-201ENSMUST00000177793 883 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm15260-201ENSMUST00000179402 883 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Mir6911-201ENSMUST00000184241 69 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm45473-201ENSMUST00000211452 616 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
OtofQ9ESF1 Gm3266-201ENSMUST00000217832 591 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.48□□□□□ -1.37
OtofQ9ESF1 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.48□□□□□ -1.37
OtofQ9ESF1 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm14529-201ENSMUST00000117894 406 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm25342-201ENSMUST00000157459 122 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm25374-201ENSMUST00000158158 101 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm22094-201ENSMUST00000158976 117 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.47□□□□□ -1.37
OtofQ9ESF1 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Gm8256-203ENSMUST00000228692 591 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
OtofQ9ESF1 Olfr519-201ENSMUST00000084752 960 ntBASIC6.47□□□□□ -1.37
OtofQ9ESF1 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms