Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm20128-201ENSMUST00000196189 417 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm2860-201ENSMUST00000199226 707 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm44705-201ENSMUST00000206719 339 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm18338-201ENSMUST00000222381 560 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm18960-201ENSMUST00000222962 713 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nkx6-1Q99MA9 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nkx6-1Q99MA9 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm26417-201ENSMUST00000104274 135 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm2178-201ENSMUST00000104927 357 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm22953-201ENSMUST00000116724 101 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm12593-201ENSMUST00000120981 743 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm13669-201ENSMUST00000122366 457 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm23429-201ENSMUST00000122486 149 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm23430-201ENSMUST00000122490 314 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm25342-201ENSMUST00000157459 122 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm24236-201ENSMUST00000157794 134 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm17022-201ENSMUST00000166415 922 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm26528-201ENSMUST00000181965 283 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm38061-201ENSMUST00000192490 365 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm43308-201ENSMUST00000197236 373 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm44003-201ENSMUST00000203024 490 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm44192-201ENSMUST00000204195 556 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm45734-201ENSMUST00000211916 411 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.89□□□□□ -1.31
Nkx6-1Q99MA9 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms