Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm12630-201ENSMUST00000121575 784 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm9428-201ENSMUST00000127214 769 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm26346-201ENSMUST00000157525 329 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm25550-201ENSMUST00000158079 128 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm27295-201ENSMUST00000184264 153 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm37322-201ENSMUST00000193409 337 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm43392-201ENSMUST00000196560 434 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm9710-201ENSMUST00000198053 499 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm44360-201ENSMUST00000200081 82 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm43850-201ENSMUST00000202021 578 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm7554-201ENSMUST00000202282 574 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm21731-201ENSMUST00000079524 489 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm44916-201ENSMUST00000208664 2194 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.8□□□□□ -1.48
Scrt1Q99M85 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm8250-201ENSMUST00000117398 774 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm11972-201ENSMUST00000118514 389 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm11533-201ENSMUST00000120287 477 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm3810-201ENSMUST00000122413 476 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm23674-201ENSMUST00000157473 131 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm25904-201ENSMUST00000158491 143 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm3140-201ENSMUST00000163523 481 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm27507-201ENSMUST00000184199 93 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm37430-201ENSMUST00000193039 196 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm36939-201ENSMUST00000194889 439 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm44809-201ENSMUST00000208305 993 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm5055-201ENSMUST00000215697 581 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Zfp850-201ENSMUST00000099111 941 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.79□□□□□ -1.48
Scrt1Q99M85 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.79□□□□□ -1.48
Scrt1Q99M85 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms