Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm12874-201ENSMUST00000117190 913 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm26486-201ENSMUST00000158021 110 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm24545-201ENSMUST00000158651 85 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm2976-201ENSMUST00000160362 513 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm29650-201ENSMUST00000188485 742 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm2225-201ENSMUST00000209570 377 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm7780-201ENSMUST00000214787 406 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Lsm1Q8VC85 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.26□□□□□ -1.41
Lsm1Q8VC85 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm15316-201ENSMUST00000121082 421 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm24442-201ENSMUST00000157238 327 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm24680-201ENSMUST00000158759 126 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm9529-201ENSMUST00000177598 579 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm29214-201ENSMUST00000190216 570 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm28620-201ENSMUST00000190463 439 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm20926-201ENSMUST00000194457 696 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms