Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Vps53Q8CCB4 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.75□□□□□ -1.17
Vps53Q8CCB4 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.75□□□□□ -1.17
Vps53Q8CCB4 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Vps53Q8CCB4 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm22267-201ENSMUST00000104008 131 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm14466-201ENSMUST00000119028 451 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm12140-201ENSMUST00000121214 544 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm6074-201ENSMUST00000193340 451 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm5711-201ENSMUST00000197896 421 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm18012-201ENSMUST00000204558 773 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm4042-201ENSMUST00000216946 637 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Vps53Q8CCB4 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm25785-201ENSMUST00000104129 125 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm25724-201ENSMUST00000104531 117 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm14070-201ENSMUST00000120773 428 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm24383-201ENSMUST00000122691 333 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm23903-201ENSMUST00000157566 131 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Mir5617-201ENSMUST00000176786 57 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Mir3473g-201ENSMUST00000183494 136 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm37355-201ENSMUST00000193345 606 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm45878-201ENSMUST00000211839 241 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Vps53Q8CCB4 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms