Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm22604-201ENSMUST00000157604 311 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm22993-201ENSMUST00000175423 254 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm27804-201ENSMUST00000185135 119 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm37376-201ENSMUST00000192176 453 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm2229-201ENSMUST00000193328 710 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm29784-201ENSMUST00000196217 406 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 AC154424.1-201ENSMUST00000225883 799 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim9Q8C7M3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm12874-201ENSMUST00000117190 913 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm12540-201ENSMUST00000121938 319 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm7613-201ENSMUST00000139070 487 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Mir3473a-201ENSMUST00000175011 78 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm9285-201ENSMUST00000177691 697 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm19480-201ENSMUST00000185547 667 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm43203-201ENSMUST00000200130 558 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm19885-201ENSMUST00000212853 343 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 AC122305.2-201ENSMUST00000215148 834 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim9Q8C7M3 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.18□□□□□ -1.26
Trim9Q8C7M3 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.17□□□□□ -1.26
Trim9Q8C7M3 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms