Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37430-201ENSMUST00000193039 196 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm4742-201ENSMUST00000200261 771 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm46223-201ENSMUST00000215196 675 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm9315-201ENSMUST00000222696 908 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm2065-201ENSMUST00000194697 2757 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm24065-201ENSMUST00000157487 264 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm28353-201ENSMUST00000186482 570 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm28533-201ENSMUST00000186741 570 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm7626-201ENSMUST00000195801 353 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm37520-201ENSMUST00000194883 2672 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm11105-201ENSMUST00000112781 478 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm8692-201ENSMUST00000118102 438 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm23891-201ENSMUST00000158114 138 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm21772-201ENSMUST00000169213 478 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm17126-201ENSMUST00000172276 523 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm27219-201ENSMUST00000184633 742 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm18405-201ENSMUST00000220743 511 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Tcf24-201ENSMUST00000097824 2639 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm8276-201ENSMUST00000192231 1812 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm42866-201ENSMUST00000195919 3304 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm24888-201ENSMUST00000104387 130 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm13013-201ENSMUST00000119087 523 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm14038-201ENSMUST00000121500 807 ntBASIC5.85□□□□□ -1.47
Col6a6Q8C6K9 Gm2539-203ENSMUST00000181352 746 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms