Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
H3f3aP84244 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm25760-201ENSMUST00000103989 132 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm11504-201ENSMUST00000120211 173 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm8089-201ENSMUST00000122463 968 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.81□□□□□ -1.48
H3f3aP84244 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm25057-201ENSMUST00000157366 88 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm25550-201ENSMUST00000158079 128 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm2619-202ENSMUST00000166777 651 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Mir3060-201ENSMUST00000175339 83 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm26509-201ENSMUST00000180947 948 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm44892-201ENSMUST00000208595 488 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
H3f3aP84244 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
H3f3aP84244 Glycam1-204ENSMUST00000228895 641 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm6436-201ENSMUST00000077163 451 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm23238-201ENSMUST00000083007 164 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Mir7b-201ENSMUST00000083557 111 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.81□□□□□ -1.48
H3f3aP84244 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
H3f3aP84244 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
H3f3aP84244 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.81□□□□□ -1.48
H3f3aP84244 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
H3f3aP84244 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3f3aP84244 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
H3f3aP84244 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Gm14489-201ENSMUST00000120868 901 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Gm12101-201ENSMUST00000121590 390 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC5.8□□□□□ -1.48
H3f3aP84244 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.8□□□□□ -1.48
H3f3aP84244 Gm23071-201ENSMUST00000158242 115 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Gm25989-201ENSMUST00000158761 133 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Gm4202-201ENSMUST00000169025 733 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Mir6367-201ENSMUST00000183385 102 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Gm28443-201ENSMUST00000189081 698 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.8□□□□□ -1.48
H3f3aP84244 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Gm7780-201ENSMUST00000214787 406 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.8□□□□□ -1.48
H3f3aP84244 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Gm29486-201ENSMUST00000088648 372 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms