Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Atxn1P54254 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.76□□□□□ -1.33
Atxn1P54254 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.76□□□□□ -1.33
Atxn1P54254 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Atxn1P54254 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Atxn1P54254 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm11984-201ENSMUST00000118142 766 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm11343-201ENSMUST00000120579 599 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm6542-201ENSMUST00000153606 772 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm26346-201ENSMUST00000157525 329 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm26357-201ENSMUST00000158218 115 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm22262-201ENSMUST00000158713 86 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm28847-201ENSMUST00000186778 700 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.75□□□□□ -1.33
Atxn1P54254 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Desi2-202ENSMUST00000069568 1193 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Atxn1P54254 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.75□□□□□ -1.33
Atxn1P54254 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Atxn1P54254 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Atxn1P54254 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Atxn1P54254 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Gm44286-201ENSMUST00000204098 1487 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Mir760-201ENSMUST00000103257 119 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm25724-201ENSMUST00000104531 117 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm11256-201ENSMUST00000118109 829 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm15078-201ENSMUST00000118371 782 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm12731-201ENSMUST00000120932 268 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.74□□□□□ -1.33
Atxn1P54254 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Atxn1P54254 Gm25219-201ENSMUST00000157545 330 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.74□□□□□ -1.33
Atxn1P54254 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm26729-201ENSMUST00000180744 352 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm28958-201ENSMUST00000185864 703 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm43141-201ENSMUST00000199695 274 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm7769-201ENSMUST00000212900 933 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm18899-201ENSMUST00000217663 546 ntBASIC6.74□□□□□ -1.33
Atxn1P54254 Gm19186-201ENSMUST00000219922 333 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms