Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm18980-201ENSMUST00000199098 1079 ntBASIC7.51□□□□□ -1.21
Sox1P53783 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.51□□□□□ -1.21
Sox1P53783 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.51□□□□□ -1.21
Sox1P53783 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.51□□□□□ -1.21
Sox1P53783 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.51□□□□□ -1.21
Sox1P53783 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.51□□□□□ -1.21
Sox1P53783 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.51□□□□□ -1.21
Sox1P53783 CT571256.1-201ENSMUST00000226045 585 ntBASIC7.51□□□□□ -1.21
Sox1P53783 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.51□□□□□ -1.21
Sox1P53783 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Sox1P53783 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Sox1P53783 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Sox1P53783 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Sox1P53783 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC7.51□□□□□ -1.21
Sox1P53783 Synpo2-201ENSMUST00000051443 3719 ntBASIC7.51□□□□□ -1.21
Sox1P53783 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.51□□□□□ -1.21
Sox1P53783 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Sox1P53783 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Sox1P53783 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Sox1P53783 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Sox1P53783 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Sox1P53783 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm22774-201ENSMUST00000102084 109 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Mir92b-201ENSMUST00000102300 83 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm15616-201ENSMUST00000118662 375 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm4914-201ENSMUST00000119757 459 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm5387-201ENSMUST00000119776 857 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm11553-201ENSMUST00000120682 240 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm15300-201ENSMUST00000122324 279 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm9672-201ENSMUST00000166437 425 ntBASIC7.5□□□□□ -1.21
Sox1P53783 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.5□□□□□ -1.21
Sox1P53783 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm26528-201ENSMUST00000181965 283 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm27960-201ENSMUST00000183445 184 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm20885-201ENSMUST00000190192 654 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm36961-201ENSMUST00000191980 132 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm37770-201ENSMUST00000192855 772 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm29740-201ENSMUST00000193182 655 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm36866-201ENSMUST00000193343 657 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm36047-201ENSMUST00000193659 657 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm20857-201ENSMUST00000194766 657 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm20858-201ENSMUST00000195459 657 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm9504-201ENSMUST00000196322 468 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm43431-201ENSMUST00000198577 340 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm44705-201ENSMUST00000206719 339 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms